added tests for PY-15295

This commit is contained in:
Ekaterina Tuzova
2015-04-02 19:42:30 +03:00
parent ee45301b11
commit c5255cc253
6 changed files with 321 additions and 1 deletions
@@ -45,7 +45,7 @@ public class NumpyDocStringTypeProvider extends PyTypeProviderBase {
private static final Map<String, String> NUMPY_ALIAS_TO_REAL_TYPE = new HashMap<String, String>();
static {
NUMPY_ALIAS_TO_REAL_TYPE.put("ndarray", "numpy.core.multiarray.ndarray or collections.Iterable");
NUMPY_ALIAS_TO_REAL_TYPE.put("ndarray", "numpy.core.multiarray.ndarray");
NUMPY_ALIAS_TO_REAL_TYPE.put("numpy.ndarray", "numpy.core.multiarray.ndarray");
// 184 occurrences
NUMPY_ALIAS_TO_REAL_TYPE.put("array_like", "numpy.core.multiarray.ndarray or collections.Iterable");
@@ -0,0 +1,89 @@
def argsort(a, axis=-1, kind='quicksort', order=None):
"""
Returns the indices that would sort an array.
Perform an indirect sort along the given axis using the algorithm specified
by the `kind` keyword. It returns an array of indices of the same shape as
`a` that index data along the given axis in sorted order.
Parameters
----------
a : array_like
Array to sort.
axis : int or None, optional
Axis along which to sort. The default is -1 (the last axis). If None,
the flattened array is used.
kind : {'quicksort', 'mergesort', 'heapsort'}, optional
Sorting algorithm.
order : list, optional
When `a` is an array with fields defined, this argument specifies
which fields to compare first, second, etc. Not all fields need be
specified.
Returns
-------
index_array : ndarray, int
Array of indices that sort `a` along the specified axis.
In other words, ``a[index_array]`` yields a sorted `a`.
See Also
--------
sort : Describes sorting algorithms used.
lexsort : Indirect stable sort with multiple keys.
ndarray.sort : Inplace sort.
argpartition : Indirect partial sort.
Notes
-----
See `sort` for notes on the different sorting algorithms.
As of NumPy 1.4.0 `argsort` works with real/complex arrays containing
nan values. The enhanced sort order is documented in `sort`.
Examples
--------
One dimensional array:
>>> x = np.array([3, 1, 2])
>>> np.argsort(x)
array([1, 2, 0])
Two-dimensional array:
>>> x = np.array([[0, 3], [2, 2]])
>>> x
array([[0, 3],
[2, 2]])
>>> np.argsort(x, axis=0)
array([[0, 1],
[1, 0]])
>>> np.argsort(x, axis=1)
array([[0, 1],
[0, 1]])
Sorting with keys:
>>> x = np.array([(1, 0), (0, 1)], dtype=[('x', '<i4'), ('y', '<i4')])
>>> x
array([(1, 0), (0, 1)],
dtype=[('x', '<i4'), ('y', '<i4')])
>>> np.argsort(x, order=('x','y'))
array([1, 0])
>>> np.argsort(x, order=('y','x'))
array([0, 1])
"""
try:
argsort = a.argsort
except AttributeError:
return _wrapit(a, 'argsort', axis, kind, order)
return argsort(axis, kind, order)
x = np.array([(1, 0), (0, 1)], dtype=[('x', '<i4'), ('y', '<i4')])
argsort(x, order=('x', 'y'))
@@ -0,0 +1,46 @@
def empty(shape, dtype=None, order='C'): # real signature unknown; restored from __doc__
"""
empty(shape, dtype=float, order='C')
Return a new array of given shape and type, without initializing entries.
Parameters
----------
shape : int or tuple of int
Shape of the empty array
dtype : data-type, optional
Desired output data-type.
order : {'C', 'F'}, optional
Whether to store multi-dimensional data in C (row-major) or
Fortran (column-major) order in memory.
Returns
-------
out : ndarray
Array of uninitialized (arbitrary) data with the given
shape, dtype, and order.
See Also
--------
empty_like, zeros, ones
Notes
-----
`empty`, unlike `zeros`, does not set the array values to zero,
and may therefore be marginally faster. On the other hand, it requires
the user to manually set all the values in the array, and should be
used with caution.
Examples
--------
>>> np.empty([2, 2])
array([[ -9.74499359e+001, 6.69583040e-309],
[ 2.13182611e-314, 3.06959433e-309]]) #random
>>> np.empty([2, 2], dtype=int)
array([[-1073741821, -1067949133],
[ 496041986, 19249760]]) #random
"""
pass
empty([2, 2])
@@ -0,0 +1,47 @@
def transpose(a, axes=None):
"""
Permute the dimensions of an array.
Parameters
----------
a : array_like
Input array.
axes : list of ints, optional
By default, reverse the dimensions, otherwise permute the axes
according to the values given.
Returns
-------
p : ndarray
`a` with its axes permuted. A view is returned whenever
possible.
See Also
--------
rollaxis
Examples
--------
>>> x = np.arange(4).reshape((2,2))
>>> x
array([[0, 1],
[2, 3]])
>>> np.transpose(x)
array([[0, 2],
[1, 3]])
>>> x = np.ones((1, 2, 3))
>>> np.transpose(x, (1, 0, 2)).shape
(2, 1, 3)
"""
try:
transpose = a.transpose
except AttributeError:
return _wrapit(a, 'transpose', axes)
return transpose(axes)
x = np.ones((1, 2, 3))
a = transpose(x, (1, 0, 2)).shape
@@ -0,0 +1,122 @@
class vectorize(object):
"""
vectorize(pyfunc, otypes='', doc=None, excluded=None, cache=False)
Generalized function class.
Define a vectorized function which takes a nested sequence
of objects or numpy arrays as inputs and returns a
numpy array as output. The vectorized function evaluates `pyfunc` over
successive tuples of the input arrays like the python map function,
except it uses the broadcasting rules of numpy.
The data type of the output of `vectorized` is determined by calling
the function with the first element of the input. This can be avoided
by specifying the `otypes` argument.
Parameters
----------
pyfunc : callable
A python function or method.
otypes : str or list of dtypes, optional
The output data type. It must be specified as either a string of
typecode characters or a list of data type specifiers. There should
be one data type specifier for each output.
doc : str, optional
The docstring for the function. If `None`, the docstring will be the
``pyfunc.__doc__``.
excluded : set, optional
Set of strings or integers representing the positional or keyword
arguments for which the function will not be vectorized. These will be
passed directly to `pyfunc` unmodified.
.. versionadded:: 1.7.0
cache : bool, optional
If `True`, then cache the first function call that determines the number
of outputs if `otypes` is not provided.
.. versionadded:: 1.7.0
Returns
-------
vectorized : callable
Vectorized function.
Examples
--------
>>> def myfunc(a, b):
... "Return a-b if a>b, otherwise return a+b"
... if a > b:
... return a - b
... else:
... return a + b
>>> vfunc = np.vectorize(myfunc)
>>> vfunc([1, 2, 3, 4], 2)
array([3, 4, 1, 2])
The docstring is taken from the input function to `vectorize` unless it
is specified
>>> vfunc.__doc__
'Return a-b if a>b, otherwise return a+b'
>>> vfunc = np.vectorize(myfunc, doc='Vectorized `myfunc`')
>>> vfunc.__doc__
'Vectorized `myfunc`'
The output type is determined by evaluating the first element of the input,
unless it is specified
>>> out = vfunc([1, 2, 3, 4], 2)
>>> type(out[0])
<type 'numpy.int32'>
>>> vfunc = np.vectorize(myfunc, otypes=[np.float])
>>> out = vfunc([1, 2, 3, 4], 2)
>>> type(out[0])
<type 'numpy.float64'>
The `excluded` argument can be used to prevent vectorizing over certain
arguments. This can be useful for array-like arguments of a fixed length
such as the coefficients for a polynomial as in `polyval`:
>>> def mypolyval(p, x):
... _p = list(p)
... res = _p.pop(0)
... while _p:
... res = res*x + _p.pop(0)
... return res
>>> vpolyval = np.vectorize(mypolyval, excluded=['p'])
>>> vpolyval(p=[1, 2, 3], x=[0, 1])
array([3, 6])
Positional arguments may also be excluded by specifying their position:
>>> vpolyval.excluded.add(0)
>>> vpolyval([1, 2, 3], x=[0, 1])
array([3, 6])
Notes
-----
The `vectorize` function is provided primarily for convenience, not for
performance. The implementation is essentially a for loop.
If `otypes` is not specified, then a call to the function with the
first argument will be used to determine the number of outputs. The
results of this call will be cached if `cache` is `True` to prevent
calling the function twice. However, to implement the cache, the
original function must be wrapped which will slow down subsequent
calls, so only do this if your function is expensive.
The new keyword argument interface and `excluded` argument support
further degrades performance.
"""
def __init__(self, pyfunc, otypes='', doc=None, excluded=None,
cache=False):
pass
def mypolyval(): pass
vpolyval = vectorize(mypolyval, excluded=['p'])
@@ -33,4 +33,20 @@ public class PyNumpyTypeTest extends PyTestCase {
public void testDtype() {
doTest();
}
public void testEmpty() {
doTest();
}
public void testTranspose() {
doTest();
}
public void testArgSort() {
doTest();
}
public void testVectorize() {
doTest();
}
}