diff --git a/java/compiler/tests/com/intellij/compiler/progress/CompilerBuildViewTest.kt b/java/compiler/tests/com/intellij/compiler/progress/CompilerBuildViewTest.kt
index 1ebaa2596064..ddfcb7cff863 100644
--- a/java/compiler/tests/com/intellij/compiler/progress/CompilerBuildViewTest.kt
+++ b/java/compiler/tests/com/intellij/compiler/progress/CompilerBuildViewTest.kt
@@ -1,4 +1,4 @@
-// Copyright 2000-2024 JetBrains s.r.o. and contributors. Use of this source code is governed by the Apache 2.0 license.
+// Copyright 2000-2025 JetBrains s.r.o. and contributors. Use of this source code is governed by the Apache 2.0 license.
 package com.intellij.compiler.progress
 
 import com.intellij.build.BuildWorkspaceConfiguration
@@ -83,7 +83,6 @@ class CompilerBuildViewTest : BaseCompilerTestCase() {
           Running 'before' tasks
           Checking sources
           Copying resources… [a]
-          Updating dependency information… [a]
           Parsing java… [a]
           Writing classes… [a]
           Adding nullability assertions… [a]
@@ -119,7 +118,6 @@ class CompilerBuildViewTest : BaseCompilerTestCase() {
         Running 'before' tasks
         Checking sources
         Copying resources… [a]
-        Updating dependency information… [a]
         Parsing java… [a]
         Writing classes… [a]
         Adding nullability assertions… [a]
diff --git a/jps/jps-builders/src/org/jetbrains/jps/builders/java/JavaBuilderUtil.java b/jps/jps-builders/src/org/jetbrains/jps/builders/java/JavaBuilderUtil.java
index 46f52ec890e7..d735af627ccd 100644
--- a/jps/jps-builders/src/org/jetbrains/jps/builders/java/JavaBuilderUtil.java
+++ b/jps/jps-builders/src/org/jetbrains/jps/builders/java/JavaBuilderUtil.java
@@ -549,7 +549,9 @@ public final class JavaBuilderUtil {
     }
 
     if (performIntegrate) {
-      context.processMessage(new ProgressMessage(JpsBuildBundle.message("progress.message.updating.dependency.information.0", chunk.getPresentableShortName())));
+      if (!Iterators.isEmpty(diffResult.getAffectedSources()) || !Iterators.isEmpty(diffResult.getDeletedNodes())) { // avoid excessive messaging
+        context.processMessage(new ProgressMessage(JpsBuildBundle.message("progress.message.updating.dependency.information.0", chunk.getPresentableShortName())));
+      }
       dependencyGraph.integrate(diffResult);
     }
 
diff --git a/jps/jps-builders/src/org/jetbrains/jps/incremental/dependencies/LibraryDependenciesUpdater.java b/jps/jps-builders/src/org/jetbrains/jps/incremental/dependencies/LibraryDependenciesUpdater.java
index e9d5fa255c5a..911528616d87 100644
--- a/jps/jps-builders/src/org/jetbrains/jps/incremental/dependencies/LibraryDependenciesUpdater.java
+++ b/jps/jps-builders/src/org/jetbrains/jps/incremental/dependencies/LibraryDependenciesUpdater.java
@@ -162,12 +162,7 @@ public final class LibraryDependenciesUpdater {
       }
     }
     else if (diffParams.isCalculateAffected()) {
-      Iterable<NodeSource> affectedSources = diffResult.getAffectedSources();
-      final String infoMessage = JpsBuildBundle.message("progress.message.dependency.analysis.found.0.affected.files", count(affectedSources));
-      LOG.info(infoMessage);
-      context.processMessage(new ProgressMessage(infoMessage));
-
-      markAffectedFilesDirty(context, map(affectedSources, ns -> pathMapper.toPath(ns)));
+      markAffectedFilesDirty(context, map(diffResult.getAffectedSources(), ns -> pathMapper.toPath(ns)));
     }
 
     graph.integrate(diffResult);
@@ -184,6 +179,11 @@ public final class LibraryDependenciesUpdater {
     if (isEmpty(affectedFiles)) {
       return;
     }
+
+    final String infoMessage = JpsBuildBundle.message("progress.message.dependency.analysis.found.0.affected.files", count(affectedFiles));
+    LOG.info(infoMessage);
+    context.processMessage(new ProgressMessage(infoMessage));
+
     ProjectDescriptor projectDescriptor = context.getProjectDescriptor();
     BuildRootIndex buildRootIndex = projectDescriptor.getBuildRootIndex();
     JavaModuleIndex moduleIndex = JpsJavaExtensionService.getInstance().getJavaModuleIndex(projectDescriptor.getProject());